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Task 22288884

Task 22288884

Name oifs_43r3_ps_0828_2016050100_123_985_12202472_0
Workunit 12202472
Created 24 Dec 2022, 16:24:39 UTC
Sent 25 Dec 2022, 17:35:15 UTC
Report deadline 24 Jan 2023, 17:35:15 UTC
Received 27 Dec 2022, 8:06:02 UTC
Server state Over
Outcome Computation error
Client state Aborted by user
Exit status 203 (0x000000CB) EXIT_ABORTED_VIA_GUI
Computer ID 1537450
Run time 12 hours 58 min 33 sec
CPU time 34 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 5.71 GFLOPS
Application version OpenIFS 43r3 Perturbed Surface v1.05
x86_64-pc-linux-gnu
Peak working set size 2,635.33 MB
Peak swap size 3,236.07 MB
Peak disk usage 382.12 MB
Stderr
<core_client_version>7.16.6</core_client_version>
<![CDATA[
<message>
aborted by user</message>
<stderr_txt>
(argv0) ../../projects/climateprediction.net/oifs_43r3_ps_1.05_x86_64-pc-linux-gnu
(argv1) start_date: 2016050100
(argv2) exptid: hq0f
(argv3) unique_member_id: 0828
(argv4) batchid: 985
(argv5) wuid: 12202472
(argv6) fclen: 123
(argv7) app_name: oifs_43r3_ps
(argv8) nthreads: 1
Working directory is: /var/lib/boinc-client/slots/4
Project directory is: /var/lib/boinc-client/projects/climateprediction.net/
app name: oifs_43r3_ps
version: 1.05
Location of temp folder: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12202472
Copying: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip to: /var/lib/boinc-client/slots/4/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Unzipping the app zip file: /var/lib/boinc-client/slots/4/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Copying the namelist files from: ../../projects/climateprediction.net/jf_073d5d47b191e336daf346d60e01e96c to: /var/lib/boinc-client/slots/4/oifs_43r3_ps_0828_2016050100_123_985_12202472.zip
Unzipping the namelist zip file: /var/lib/boinc-client/slots/4/oifs_43r3_ps_0828_2016050100_123_985_12202472.zip
ic_ancil_file: ic_ancil_12202472
ifsdata_file: ifsdata_12202472
climate_data_file: clim_data_12202472
horiz_resolution: 159
vert_resolution: 60
grid_type: l_2
upload_interval: 24
utstep: 3600
nfrres: restart dump frequency (steps) 24
Copying IC ancils from: ../../projects/climateprediction.net/jf_94b52b014424b7f0b1fb532857507dbd to: /var/lib/boinc-client/slots/4/ic_ancil_12202472.zip
Unzipping the IC ancils zip file: /var/lib/boinc-client/slots/4/ic_ancil_12202472.zip
Copying the ifsdata_file from: ../../projects/climateprediction.net/jf_2da07ad0891dbf7f6055db8fe72cd68d to: /var/lib/boinc-client/slots/4/ifsdata/ifsdata_12202472.zip
Unzipping the ifsdata_zip file: /var/lib/boinc-client/slots/4/ifsdata/ifsdata_12202472.zip
Copying the climate data file from: ../../projects/climateprediction.net/jf_f32c668cf7829426ffd94699b48b9a2e to: /var/lib/boinc-client/slots/4/159l_2/clim_data_12202472.zip
Unzipping the climate data zip file: /var/lib/boinc-client/slots/4/159l_2/clim_data_12202472.zip
Checking for progress XML file: /var/lib/boinc-client/slots/4/progress_file_12202472.xml
Creating progress file: /var/lib/boinc-client/slots/4/progress_file_12202472.xml
last_cpu_time: 0
upload_file_number: 0
last_iter: 0
last_upload: 0
model_completed: 0
total_length_of_simulation: 10627200
result_base_name: oifs_43r3_ps_0828_2016050100_123_985_12202472_0_r798127512
The child process has been launched with process id: 85700
Executing the command: /var/lib/boinc-client/slots/4/oifs_43r3_model.exe
[EC_DRHOOK:hostname:myproc:omptid:pid:unixtid] [YYYYMMDD:HHMMSS:epoch:walltime] [function@file:lineno] -- Max OpenMP threads = 1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2091] fp = 0x3129fe0
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2098] DR_HOOK_ALLOW_COREDUMP=-1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2104] Hardlimit for core file is now 0 (0x0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2122] DR_HOOK_PROFILE_PROC=-1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2128] DR_HOOK_PROFILE_LIMIT=-10.000
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2194] DR_HOOK_RANDOM_MEMSTAT=0  (RAND_MAX=2147483647)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2205] DR_HOOK_HASHBITS=16
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2213] DR_HOOK_NCALLSTACK=0
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2221] DR_HOOK_HARAKIRI_TIMEOUT=500
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2228] DR_HOOK_TRAPFPE=1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2235] DR_HOOK_TRAPFPE_INVALID=1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2242] DR_HOOK_TRAPFPE_DIVBYZERO=1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [process_options@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:2249] DR_HOOK_TRAPFPE_OVERFLOW=1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [ignore_signals@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1227] DR_HOOK_IGNORE_SIGNALS=<undef>
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [restore_default_signals@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1178] DR_HOOK_RESTORE_DEFAULT_SIGNALS=<undef>
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1937] New signal handler 'signal_drhook' for signal#6 (SIGABRT) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1938] New signal handler 'signal_drhook' for signal#7 (SIGBUS) at 0x81f820 (old at (nil))
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1939] New signal handler 'signal_drhook' for signal#11 (SIGSEGV) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1944] New signal handler 'signal_drhook' for signal#16 (SIGSTKFLT) at 0x81f820 (old at (nil))
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [trapfpe_treatment@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1149] DR_HOOK enables SIGFPE-related floating point trapping since DRHOOK_TRAPFPE=1
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1948] New signal handler 'signal_drhook' for signal#8 (SIGFPE) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1949] New signal handler 'signal_drhook' for signal#4 (SIGILL) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1951] New signal handler 'signal_drhook' for signal#5 (SIGTRAP) at 0x81f820 (old at (nil))
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1952] New signal handler 'signal_drhook' for signal#2 (SIGINT) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1960] New signal handler 'signal_drhook' for signal#3 (SIGQUIT) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1961] New signal handler 'signal_drhook' for signal#15 (SIGTERM) at 0x81f820 (old at 0x1ce8bb0)
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1966] New signal handler 'signal_drhook' for signal#24 (SIGXCPU) at 0x81f820 (old at (nil))
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1968] New signal handler 'signal_drhook' for signal#25 (SIGXFSZ) at 0x81f820 (old at (nil))
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [signal_drhook_init@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1973] New signal handler 'signal_drhook' for signal#31 (SIGSYS) at 0x81f820 (old at (nil))
[EC_DRHOOK:1230linux:1:1:85700:85700] [20221225:183621:1671989781:0.000] [catch_signals@/home/glenn/github/jamie_oifs43r3.git/src/ifsaux/support/drhook.c:1111] DR_HOOK_CATCH_SIGNALS=<undef>
  18:37:34 STEP    0 H=   0:00 +CPU= 31.313
Moving to projects directory: /var/lib/boinc-client/slots/4/ICMGGhq0f+000000
Moving to projects directory: /var/lib/boinc-client/slots/4/ICMSHhq0f+000000
Moving to projects directory: /var/lib/boinc-client/slots/4/ICMUAhq0f+000000
(argv0) ../../projects/climateprediction.net/oifs_43r3_ps_1.05_x86_64-pc-linux-gnu
(argv1) start_date: 2016050100
(argv2) exptid: hq0f
(argv3) unique_member_id: 0828
(argv4) batchid: 985
(argv5) wuid: 12202472
(argv6) fclen: 123
(argv7) app_name: oifs_43r3_ps
(argv8) nthreads: 1
Working directory is: /var/lib/boinc-client/slots/4
Project directory is: /var/lib/boinc-client/projects/climateprediction.net/
app name: oifs_43r3_ps
version: 1.05
Location of temp folder: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12202472
..mkdir for temp folder for results failed
Copying: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip to: /var/lib/boinc-client/slots/4/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Unzipping the app zip file: /var/lib/boinc-client/slots/4/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Copying the namelist files from: ../../projects/climateprediction.net/jf_073d5d47b191e336daf346d60e01e96c to: /var/lib/boinc-client/slots/4/oifs_43r3_ps_0828_2016050100_123_985_12202472.zip
Unzipping the namelist zip file: /var/lib/boinc-client/slots/4/oifs_43r3_ps_0828_2016050100_123_985_12202472.zip
ic_ancil_file: ic_ancil_12202472
ifsdata_file: ifsdata_12202472
climate_data_file: clim_data_12202472
horiz_resolution: 159
vert_resolution: 60
grid_type: l_2
upload_interval: 24
utstep: 3600
nfrres: restart dump frequency (steps) 24
Copying IC ancils from: ../../projects/climateprediction.net/jf_94b52b014424b7f0b1fb532857507dbd to: /var/lib/boinc-client/slots/4/ic_ancil_12202472.zip
Unzipping the IC ancils zip file: /var/lib/boinc-client/slots/4/ic_ancil_12202472.zip
..mkdir for ifsdata folder failed
Copying the ifsdata_file from: ../../projects/climateprediction.net/jf_2da07ad0891dbf7f6055db8fe72cd68d to: /var/lib/boinc-client/slots/4/ifsdata/ifsdata_12202472.zip
Unzipping the ifsdata_zip file: /var/lib/boinc-client/slots/4/ifsdata/ifsdata_12202472.zip
..mkdir for the climate data folder failed
Copying the climate data file from: ../../projects/climateprediction.net/jf_f32c668cf7829426ffd94699b48b9a2e to: /var/lib/boinc-client/slots/4/159l_2/clim_data_12202472.zip
Unzipping the climate data zip file: /var/lib/boinc-client/slots/4/159l_2/clim_data_12202472.zip
Checking for progress XML file: /var/lib/boinc-client/slots/4/progress_file_12202472.xml
Opened progress file ok : /var/lib/boinc-client/slots/4/progress_file_12202472.xml
terminate called after throwing an instance of 'rapidxml::parse_error'
  what():  unexpected end of data
double free or corruption (top)
(argv0) ../../projects/climateprediction.net/oifs_43r3_ps_1.05_x86_64-pc-linux-gnu
(argv1) start_date: 2016050100
(argv2) exptid: hq0f
(argv3) unique_member_id: 0828
(argv4) batchid: 985
(argv5) wuid: 12202472
(argv6) fclen: 123
(argv7) app_name: oifs_43r3_ps
(argv8) nthreads: 1
Working directory is: /var/lib/boinc-client/slots/4
Project directory is: /var/lib/boinc-client/projects/climateprediction.net/
app name: oifs_43r3_ps
version: 1.05
Location of temp folder: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_12202472
..mkdir for temp folder for results failed
Copying: /var/lib/boinc-client/projects/climateprediction.net/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip to: /var/lib/boinc-client/slots/4/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Unzipping the app zip file: /var/lib/boinc-client/slots/4/oifs_43r3_ps_app_1.05_x86_64-pc-linux-gnu.zip
Copying the namelist files from: ../../projects/climateprediction.net/jf_073d5d47b191e336daf346d60e01e96c to: /var/lib/boinc-client/slots/4/oifs_43r3_ps_0828_2016050100_123_985_12202472.zip
Unzipping the namelist zip file: /var/lib/boinc-client/slots/4/oifs_43r3_ps_0828_2016050100_123_985_12202472.zip
ic_ancil_file: ic_ancil_12202472
ifsdata_file: ifsdata_12202472
climate_data_file: clim_data_12202472
horiz_resolution: 159
vert_resolution: 60
grid_type: l_2
upload_interval: 24
utstep: 3600
nfrres: restart dump frequency (steps) 24
Copying IC ancils from: ../../projects/climateprediction.net/jf_94b52b014424b7f0b1fb532857507dbd to: /var/lib/boinc-client/slots/4/ic_ancil_12202472.zip
Unzipping the IC ancils zip file: /var/lib/boinc-client/slots/4/ic_ancil_12202472.zip
..mkdir for ifsdata folder failed
Copying the ifsdata_file from: ../../projects/climateprediction.net/jf_2da07ad0891dbf7f6055db8fe72cd68d to: /var/lib/boinc-client/slots/4/ifsdata/ifsdata_12202472.zip
Unzipping the ifsdata_zip file: /var/lib/boinc-client/slots/4/ifsdata/ifsdata_12202472.zip
..mkdir for the climate data folder failed
Copying the climate data file from: ../../projects/climateprediction.net/jf_f32c668cf7829426ffd94699b48b9a2e to: /var/lib/boinc-client/slots/4/159l_2/clim_data_12202472.zip
Unzipping the climate data zip file: /var/lib/boinc-client/slots/4/159l_2/clim_data_12202472.zip
Checking for progress XML file: /var/lib/boinc-client/slots/4/progress_file_12202472.xml
Opened progress file ok : /var/lib/boinc-client/slots/4/progress_file_12202472.xml
terminate called after throwing an instance of 'rapidxml::parse_error'
  what():  unexpected end of data
double free or corruption (top)

</stderr_txt>
]]>
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